DNA Computing

Experimental Tools.- An Object Oriented Simulation of Real Occurring Molecular Biological Processes for DNA Computing and Its Experimental Verification.- Towards Optimization of PCR Protocol in DNA Computing.- DNASequenceGenerator: A Program for the Construction of DNA Sequences.- DNA Computing in Microreactors.- Cascadable Hybridisation Transfer of Specific DNA between Microreactor Selection Modules.- Theoretical Tools.- Coding Properties of DNA Languages.- Boundary Components of Thickened Graphs.- Probabilistic Computational Models.- Population Computation and Majority Inference in Test Tube.- DNA Starts to Learn Poker.- PNA-mediated Whiplash PCR.- Computer Simulation and Sequence Design.- Biomolecular Computation in Virtual Test Tubes.- Developing Support System for Sequence Design in DNA Computing.- The Fidelity of the Tag-Antitag System.- PUNCH: An Evolutionary Algorithm for Optimizing Bit Set Selection.- Algorithms.- Solving Knapsack Problems in a Sticker Based Model.- A Clause String DNA Algorithm for SAT.- A Proposal of DNA Computing on Beads with Application to SAT Problems.- Experimental Solutions.- Aqueous Solutions of Algorithmic Problems: Emphasizing Knights on a 3 × 3.- Solutions of Shortest Path Problems by Concentration Control.- Another Realization of Aqueous Computing with Peptide Nucleic Acid.- Experimental Confirmation of the Basic Principles of Length-only Discrimination.- Experimental Construction of Very Large Scale DNA Databases with Associative Search Capability.- Nano-tech Devices.- Operation of a Purified DNA Nanoactuator.- DNA Scissors.- Biomimetic Tools.- A Realization of Information Gate by Using Enterococcus faecalis Pheromone System.- Patterns of Micronuclear Genes in Ciliates.- Peptide Computing - Universality and Complexity.-Programmed Mutagenesis Is a Universal Model of Computation.- New Computing Models.- Horn Clause Computation by Self-assembly of DNA Molecules.- DNA-based Parallel Computation of Simple Arithmetic.- Splicing Systems and Membranes.- On P Systems with Global Rules.- Computing with Membranes: Variants with an Enhanced Membrane Handling.- Towards an Electronic Implementation of Membrane Computing: A Formal Description of Non-deterministic Evolution in Transition P Systems.- Insertion-Deletion P Systems.- A Universal Time-Varying Distributed H System of Degree 1.- A Note on Graph Splicing Languages.

Includes supplementary material: sn.pub/extras